Cheap flights from Manila to Tokyo from $116

This is the cheapest one-way flight price found by a momondo user in the last 72 hours by searching for a flight from Manila to Tokyo departing on 21/2. Fares may change, and may not be available for all flights or travel dates. Click the price to refresh the search for this deal.
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Cheap return flights

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Philippines AirAsia Logo
04:45 - 10:25MNL-NRT
4h 40mdirect
Philippines AirAsia Logo
11:25 - 15:20NRT-MNL
4h 55mdirect
$258Philippines AirAsia
Find Deal
Thu, 26 Feb - Tue, 3 Mar
Philippines AirAsia Logo
10:40 - 15:50MNL-NRT
4h 10mdirect
Philippines AirAsia Logo
16:55 - 21:15NRT-MNL
5h 20mdirect
$259Philippines AirAsia
Find Deal
Fri, 27 Feb - Mon, 2 Mar
Philippines AirAsia Logo
04:45 - 10:25MNL-NRT
4h 40mdirect
Philippines AirAsia Logo
11:25 - 15:20NRT-MNL
4h 55mdirect
$261Philippines AirAsia
Find Deal
Sat, 14 Mar - Mon, 23 Mar
Jetstar Japan Logo
00:50 - 06:05MNL-NRT
4h 15mdirect
Jetstar Japan Logo
19:10 - 23:30NRT-MNL
5h 20mdirect
$310Jetstar Japan
Find Deal
Fri, 12 Dec - Tue, 27 Jan
Cebu Pacific Logo
21:30 - 10:40MNL-NRT
12h 10m1 stop
Cebu Pacific Logo
12:50 - 17:40NRT-MNL
5h 50mdirect
$316Cebu Pacific
Find Deal
Sat, 17 Jan - Wed, 21 Jan
Jetstar Japan Logo
02:40 - 22:30MNL-NRT
18h 50m1 stop
Jetstar Japan Logo
19:10 - 23:30NRT-MNL
5h 20mdirect
$321Jetstar Japan
Find Deal
Fri, 12 Dec - Tue, 27 Jan
ZIPAIR Logo
14:30 - 19:50MNL-NRT
4h 20mdirect
ZIPAIR Logo
08:55 - 13:00NRT-MNL
5h 05mdirect
$379ZIPAIR
Find Deal
Tue, 2 Dec - Sat, 6 Dec
ZIPAIR Logo
14:30 - 19:50MNL-NRT
4h 20mdirect
ZIPAIR Logo
08:55 - 13:00NRT-MNL
5h 05mdirect
$381ZIPAIR
Find Deal
Mon, 1 Dec - Fri, 5 Dec
Philippine Airlines Logo
03:05 - 13:35MNL-NRT
9h 30m1 stop
Philippine Airlines Logo
14:45 - 23:40NRT-MNL
9h 55m1 stop
$384Philippine Airlines
Find Deal
Sun, 30 Nov - Fri, 5 Dec
Philippine Airlines Logo
19:00 - 00:20MNL-HND
4h 20mdirect
Philippine Airlines Logo
01:45 - 05:50HND-MNL
5h 05mdirect
$406Philippine Airlines
Find Deal
Sat, 14 Mar - Sun, 22 Mar

Jetstar Japan flights from Manila to Tokyo

Our best Jetstar Japan deals on Manila to Tokyo flight tickets
Jetstar Japan
12 Dec
MNL00:50Manila Ninoy Aquino Intl
4h 15m
NRT06:05Tokyo Narita
27 Jan
NRT19:10Tokyo Narita
5h 20m
MNL23:30Manila Ninoy Aquino Intl
Jetstar Japan
12 Dec
MNL02:40Manila Ninoy Aquino Intl
18h 50m
1 stop
NRT22:30Tokyo Narita
27 Jan
NRT19:10Tokyo Narita
5h 20m
MNL23:30Manila Ninoy Aquino Intl
Jetstar Japan
6 Dec
MNL00:50Manila Ninoy Aquino Intl
4h 15m
NRT06:05Tokyo Narita
13 Dec
NRT19:10Tokyo Narita
5h 20m
MNL23:30Manila Ninoy Aquino Intl

Philippines AirAsia flights from Manila to Tokyo

Our best Philippines AirAsia deals on Manila to Tokyo flight tickets
Philippines AirAsia
26 Feb
MNL04:45Manila Ninoy Aquino Intl
4h 40m
NRT10:25Tokyo Narita
3 Mar
NRT11:25Tokyo Narita
4h 55m
MNL15:20Manila Ninoy Aquino Intl
Philippines AirAsia
27 Feb
MNL10:40Manila Ninoy Aquino Intl
4h 10m
NRT15:50Tokyo Narita
2 Mar
NRT16:55Tokyo Narita
5h 20m
MNL21:15Manila Ninoy Aquino Intl
Philippines AirAsia
14 Mar
MNL04:45Manila Ninoy Aquino Intl
4h 40m
NRT10:25Tokyo Narita
23 Mar
NRT11:25Tokyo Narita
4h 55m
MNL15:20Manila Ninoy Aquino Intl

momondo Fare Finder

 
Customise your flight search to find flights from Manila to Tokyo that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, momondo users made 78,305 searches. Data last updated 8 November 2025.
Use the filters below to find and compare flights from Manila to Tokyo that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Thu 26/2

04:45-10:25

Nonstop4h 40m

Tokyo Narita

Tue 3/3

11:25-15:20

Nonstop4h 55m

$258

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Fri 27/2

10:40-15:50

Nonstop4h 10m

Tokyo Narita

Mon 2/3

16:55-21:15

Nonstop5h 20m

$259

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Sat 14/3

04:45-10:25

Nonstop4h 40m

Tokyo Narita

Mon 23/3

11:25-15:20

Nonstop4h 55m

$261

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Fri 12/12

00:50-06:05

Nonstop4h 15m

Tokyo Narita

Tue 27/1

19:10-23:30

Nonstop5h 20m

$310

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Sat 17/1

21:30-10:40

1 stop12h 10m

Tokyo Narita

Wed 21/1

12:50-17:40

Nonstop5h 50m

$316

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Fri 12/12

02:40-22:30

1 stop18h 50m

Tokyo Narita

Tue 27/1

19:10-23:30

Nonstop5h 20m

$321

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Tue 2/12

14:30-19:50

Nonstop4h 20m

Tokyo Narita

Sat 6/12

08:55-13:00

Nonstop5h 05m

$379

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Mon 1/12

14:30-19:50

Nonstop4h 20m

Tokyo Narita

Fri 5/12

08:55-13:00

Nonstop5h 05m

$381

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Sun 30/11

03:05-13:35

1 stop9h 30m

Tokyo Narita

Fri 5/12

14:45-23:40

1 stop9h 55m

$384

ManilaTokyo

MNL - HND

MNLHND

Manila Ninoy Aquino Intl

Sat 14/3

19:00-00:20

Nonstop4h 20m

Tokyo Haneda

Sun 22/3

01:45-05:50

Nonstop5h 05m

$406

Flights are sorted by cheapest return flights first.

Showing 1-10 of 20 resultsSorted by cheapest first
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See travel insights to Tokyo from

How to get the cheapest flight ticket from Manila to Tokyo

Look no further. We've gone through all the searches for this route on momondo so you have the important information and insights to find the cheapest flight ticket for your trip

What is the cheapest month to fly to Tokyo?

If you are unable to visit Tokyo during the month of September, then departing from Manila during the month June is also very affordable. Most momondo users find prices during this month for around $282.

What is the cheapest day to depart on your flight to Tokyo?

Our data shows that Wednesday is the least expensive day to fly to Tokyo. Tickets to fly out on this day can be as low as $300. On the other hand, Friday is the most expensive day to depart from Manila because it is more convenient for both business and leisure travellers. As a result, prices tend to be around $390.

What is the cheapest time of day to depart on your flight to Tokyo?

According to our data, the cheapest time of day to fly to Tokyo is in the morning. momondo users have found flights departing from Manila to Tokyo in the morning for as low as $316. Keep in mind that these prices may fluctuate based on what airline you choose and the time of year you plan to travel. At midday is when there is more demand to fly to Tokyo, so prices are often more expensive at around $360 per ticket.

What is the cheapest Manila Ninoy Aquino Intl to Tokyo flight route?

Fly from Manila Ninoy Aquino Intl to Tokyo Narita for the best Manila Ninoy Aquino Intl - Tokyo flight prices

How far in advance should I book a flight to Tokyo?

You are more likely to see cheaper flights to Tokyo from Manila when booking weeks ahead of your departure date. In general, you can expect to find flights to Tokyo for around $336 when searching weeks before you fly. However, flight prices might be lower outside of this timeframe. For example, people recently found flights to Tokyo from Manila for as low as $295 on momondo.

What cabin class options are available on Manila Ninoy Aquino Intl to Tokyo flights?

There are 2 cabin classes available to choose from on Manila Ninoy Aquino Intl to Tokyo flights. Cabin price and availability will vary by airline so perform a search above to find the right deals for you.

Can stopping save me money on Manila to Tokyo flights?

You could potentially save up to 74% on your flight if you consider stops on a Manila to Tokyo flight.

How have Manila to Tokyo flight prices changed over time?

As of November 2025, prices for Manila to Tokyo flights are approximately 13% cheaper when compared to flights at the same time last year.

When to book flights from Manila to Tokyo

Are you open to changing your travel dates? Check out the ideal times to fly from Manila to Tokyo according to our flight data. Find out which month and days have the cheapest flights.
Estimated return price

Cheap Manila to Tokyo (MNL to TYO) flight deals and tips

Find info about flight duration, direct flights, and airports for your flight from Manila to Tokyo

Best price found

$146

Fastest flight time

3h 55m

Direct flights

Every day

Airports in Tokyo

2 airports
The best one-way flight to Tokyo from Manila in the past 72 hours is $146. The best return flight deal from Manila to Tokyo found on momondo in the last 72 hours is $243.
The fastest flight from Manila to Tokyo takes 3h 55m
Direct flights go from Manila to Tokyo every day.
There are 2 airports near Tokyo: Tokyo Narita (NRT), Tokyo Haneda (HND)
  • How far is Manila Ninoy Aquino Intl to Tokyo by plane?

    The straight-line distance from Manila Ninoy Aquino Intl to Tokyo is 2997.4 km. By plane, this route typically takes 4h 00m.

  • When did momondo last update prices for flights from Manila Ninoy Aquino Intl Airport to Tokyo?

    Prices for flights from Manila Ninoy Aquino Intl Airport to Tokyo refresh daily.

  • How many operators does momondo search for flights from Manila Ninoy Aquino Intl Airport to Tokyo?

  • How old do you have to be to fly from Manila Ninoy Aquino Intl Airport to Tokyo?

    The minimum age a child must be to fly alone is five but airlines that offer an unaccompanied minor (UNMR) service will have their own age restrictions, including rules around flight length, timings, and stopovers. We always recommend checking with the individual airline you are booking with to travel from Manila Ninoy Aquino Intl Airport to Tokyo.

  • What documentation or ID do you need to fly to Tokyo?

    The required travel and health documents for your Tokyo trip may vary depending on your itinerary and personal circumstances. As a general rule, you should carry multiple documents, including a national ID card or driver's licence and a passport valid for six months after your intended arrival at Tokyo. We recommend that you seek guidance from your airline or a reliable third party such as IATA.

  • What is the most popular plane model from Manila to Tokyo?

  • What is the most popular airline from Manila to Tokyo?

Best airlines flying from Manila to Tokyo

Compare and see reviews for airlines that fly from Manila to Tokyo with momondo
Airline
Rating
Free cancellation
Price
Jetstar JapanPriceFrom $116Free cancellationRating
0.0
0 reviews
Search Jetstar Japan flights
Philippines AirAsiaPriceFrom $225Free cancellationRating
6.6
114 reviews
Search Philippines AirAsia flights
Cebu PacificPriceFrom $230Free cancellationRating
6.8
202 reviews
Search Cebu Pacific flights
Philippine AirlinesPriceFrom $310Free cancellationRating
7.3
935 reviews
Search Philippine Airlines flights
ZIPAIRPriceFrom $325Free cancellationRating
7.4
52 reviews
Search ZIPAIR flights
Cathay PacificPriceFrom $326Free cancellationRating
7.6
1,055 reviews
Search Cathay Pacific flights
ANAPriceFrom $377Free cancellationRating
8.4
1,003 reviews
Search ANA flights
Japan AirlinesPriceFrom $410Free cancellationRating
8.3
1,605 reviews
Search Japan Airlines flights
  • ANA Flights From Manila to Tokyo

    ANA is one of the most popular airlines flying from Manila to Tokyo, operating 39 flights/week on average for this route. A good ANA flight deal for Manila to Tokyo starts from $377 round-trip, up to an average price of $683. Our users have rated ANA at 8.4/10.

  • Japan Airlines Flights From Manila to Tokyo

    $410 is the best Japan Airlines flight deal from Manila to Tokyo found on momondo over the last 72 hours. The average Japan Airlines ticket price found was closer to $711, however, with flight time and availability significantly affecting the price. Japan Airlines (8.3/10 from 1,607 user reviews) flies into Tokyo from Manila 14 times in an average week so prices can vary.

Travelling to a place near Tokyo?

Book flights to Tokyo if you plan to visit one of these locations
Hakone
Urayasu
Atami
Chiba
Fujiyoshida
Kamakura
Kawagoe
Yamanouchi
Karuizawa
Saitama
Kusatsu
Kawasaki

Why use momondo?

Why should I use momondo to find a flight deal from Manila to Tokyo?

It is quick and easy to find Manila to Tokyo flights on momondo. We search and return numerous flight options from various airlines and agents. You can then use our filters to narrow your search until you have found the most convenient flight to Tokyo that suits you.

Can I find flights from Manila to Tokyo with flexible booking policies on momondo?

Yes. momondo enables you to select and highlight flights to Tokyo from Manila with this policy.

How can momondo help me find flights from Manila to Tokyo?

momondo provides multiple filters to help you find the best flight to Tokyo from Manila. Filter by price, airline, airports, cabin, aircraft, payment method, number of stops and more.

I’m not ready to book a flight from Manila to Tokyo right now. Can momondo alert me if prices change?

If you are not ready to book a flight from Manila to Tokyo now, use our insights above to find helpful tips or alternatively set up a price alert, where momondo will track prices on flights to Tokyo and let you know when they change.

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1 adult
Mon 8/12
Mon 15/12

Find better results for your trip to Japan

Fly into one of these airports located in Tokyo

Airports listed have a maximum distance of 56.5 km from Tokyo