Cheap flights from Manila to Tokyo from $187

If you are unable to visit Tokyo during the month of February, then departing from Manila during the month November is also very affordable. Most momondo users find prices during this month for around $362.

Our data shows that Friday is the least expensive day to fly to Tokyo. Tickets to fly out on this day can be as low as $321. On the other hand, Wednesday is the most expensive day to depart from Manila because it is more convenient for both business and leisure travellers. As a result, prices tend to be around $398.

According to our data, the cheapest time of day to fly to Tokyo is in the morning. momondo users have found flights departing from Manila to Tokyo in the morning for as low as $352. Keep in mind that these prices may fluctuate based on what airline you choose and the time of year you plan to travel. In the afternoon is when there is more demand to fly to Tokyo, so prices are often more expensive at around $463 per ticket.

Fly from Manila Ninoy Aquino Intl to Tokyo Narita for the best Manila Ninoy Aquino Intl - Tokyo flight prices

You are more likely to see cheaper flights to Tokyo from Manila when booking weeks ahead of your departure date. In general, you can expect to find flights to Tokyo for around $380 when searching weeks before you fly. However, flight prices might be lower outside of this timeframe. For example, people recently found flights to Tokyo from Manila for as low as $299 on momondo.

There are 3 cabin classes available to choose from on Manila to Tokyo flights. Cabin price and availability will vary by airline so perform a search above to find the right deals for you.

You could potentially save up to 81% on your flight if you consider stops on a Manila to Tokyo flight.

As of September 2026, prices for Manila to Tokyo flights are approximately 10% more expensive when compared to flights at the same time last year.

Jetstar Japan and Philippine Airlines are the most popular carriers operating from Manila Ninoy Aquino Intl to Tokyo

Cebu Pacific, Philippine Airlines and Philippines AirAsia are the top three most popular airlines that fly to Tokyo from Manila according to our data. Cebu Pacific is the first choice among our users, with 54% of people opting to fly with this airline when travelling to Tokyo. Keep in mind that there are 8 different airlines that fly to Tokyo on a routine basis, so you have a few additional options to choose from.

Historically, on average around 9% of flights between Manila and Tokyo have experienced a delay on any given week. The average delay length over the past 12 months has been 125 minutes.

Generally, flights departing in the evening tend to experience fewer delays. Flights departing at night have, in the past, seen delays more frequently in comparison.

Thursday is statistically the day of the week that experiences the fewest delays on this flight route. Sunday has historically seen more delays on average compared to the rest of the week.

According to our data, Japan Airlines have had the fewest delays on this route over the last 12 months, with about 5% of their flights experiencing any sort of delay.

The number of flights available between Manila and Tokyo is 15 per day as of September 2026. The most frequent departure time is 14:00, with 53% of daily flights leaving at midday.

As of September 2026, there are 111 flights per week flying from Manila to Tokyo. The most common day of the week flights depart is Mon, with 18% of flights taking off on this day.