Hotels in Nagasaki Prefecture

Shimabara is the most commonly searched city in Nagasaki Prefecture by momondo users. Prices for hotels in Shimabara are typically $74/night. Other popular cities in Nagasaki Prefecture include Nagasaki($212/night) and Sasebo($213/night).

If you’re looking for a good deal in Nagasaki Prefecture, you should know that the average hotel room price is $197/night. Anything less than $197/night would be considered a good deal. The absolute cheapest nightly rate found on momondo recently was $25.

Judging by user ratings, the best hotels in Nagasaki Prefecture are: Hotel Indigo Nagasaki Glover Street By IHG in Nagasaki (rated 9.5), and Nagasaki Marriott Hotel in Nagasaki (rated 9.4)お宿 Tsuruya in Sasebo (rated 9.3)

The most popular hotel in Nagasaki Prefecture is Hotel Okura Jr Huis Ten Bosch, which has a rating of 9.0 out of 10 from 2,989 of our users. In the past 12 months, 14% of all our users who booked hotels in Nagasaki Prefecture chose to stay at Hotel Okura Jr Huis Ten Bosch.

For a double room in Nagasaki Prefecture during the month of May, you can expect rates to be around $317 per night on average. The cheapest double room in Nagasaki Prefecture in May was $48 per night in the city of Nagasaki.

At $143 per night, Sasebo is the most expensive city in Nagasaki Prefecture to book a hotel room in. The average cost of $143 is about 29% above the country's average price per night.

Our users typically find that Sasebo has the lowest per night rates in the country at just $61. Sasebo offers hotels rooms at an average rate that is 57% lower than the average city in Nagasaki Prefecture.

If you’re looking to book a hotel in Nagasaki Prefecture that’s perfect for the whole family, then consider staying at either Hotel Nikko Huis Ten Bosch, Yumihari-no-Oka Hotel or Central Hotel Sasebo. These are the preferred hotels for families in Nagasaki Prefecture according to our user data. Rooms at Hotel Nikko Huis Ten Bosch average $175 per night, while a room at Yumihari-no-Oka Hotel is $182 per night, and staying at Central Hotel Sasebo is around $55 per night.

If you’re looking for a couples getaway somewhere in Nagasaki Prefecture, then consider booking a room at Quintessa Hotel Sasebo ($79 per night). Hotel Forza Nagasaki, for $82 per night on average, is another great couples hotel option in Nagasaki Prefecture. Our momondo users have also booked rooms at Hotel Nikko Huis Ten Bosch quite often for a couples getaway in Nagasaki Prefecture. You can expect prices for Hotel Nikko Huis Ten Bosch to be around $175 per night.

The number of operators available for hotels in Nagasaki Prefecture is 957 as of May 2026.

Prices for hotels in Nagasaki Prefecture are refreshed on a daily basis.